mpiblast
- From: Chuming Chen <chen (at) musc.edu>
- Date: Wed, 15 Mar 2006 08:17:03 -0500
Hi all,
Does the query size of mpiblast effect the total performance?
It took about 17 seconds per sequence when I run 721 sequences (542K)
against 22G database.
But when I run 88532 sequences (47M) against the same database, it took
about 1 minute.
Can the performance be improved if the query sequence is in a
relatively smaller size?
Thank you for your kind comments and suggestions.
Chuming Chen
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