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OT: GCG DVDs



Hi,

I have never faced this problem on a Linux x86_64 Dell PowerEdge 1850 wearing a
'hda: TEAC CD-ROM CD-224E, ATAPI CD/DVD-ROM drive'


If it is not a media error induced by your drive (and probably it is not if you see it with many boxes), it depends on the session level encoding they use to create the DVD's. On the Linux side, what kernel/distro and DVD drive are you wearing?


-- -- George B. Magklaras

Senior Computer Systems Engineer/UNIX Systems Administrator
The Biotechnology Centre of Oslo,
University of Oslo
http://www.biotek.uio.no/

EMBnet Norway: http://www.biotek.uio.no/EMBNET/



Andrew D. Fant wrote:
I know this is more than a little OT here, but it's my best bet to find others
who are doing battle with GCG, so I apologize and beg indulgence:

Has anyone else here been having trouble with the GCG Data DVDs that they send
out every other month with database updates?  It seems like every time I get one
that Linux, Solaris, and MacOSX all have trouble reading.  When I try and just
read one that has errors with dd or cp, I get nondescript I/O errors.  When I
try and make a tarball to take the image elsewhere to work with, I get errors
such as:
tar: ./gcggenbank/gb_pl_001.seq_z: File shrank by 22522503 bytes; padding with zeros

and the resulting tarball is useless.  I've called Accelrys tech support and
basically been told that if I have problems I ought to get a windows machine and
use an FTP daemon to install from.  Needless to say, this is less than helpful
advice as I don't have a system that I can spare to put windows on (and I am not
about to ask my boss for several hundred dollars for a system that I would use
only once every other month, to run a server for a protocol we have banned
within our organization).  Eventually, I get new DVDs, but I get a line about
being the only one complaining and a lot of runaround about it.

So, am I really a freak of nature, or should I stop expecting to get DVDs that
can be read on the same platform the data is to be installed on?

Andy




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